STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHF21BPHD finger protein 21B. (527 aa)    
Predicted Functional Partners:
ARID4A
AT-rich interactive domain-containing protein 4A.
    
 0.717
ARID4B
AT-rich interactive domain-containing protein 4B.
    
 0.717
RCOR3
REST corepressor 3.
    
 0.659
RCOR1
REST corepressor 1.
    
 0.637
RBBP7
Histone-binding protein RBBP7.
   
 0.609
RBBP4
Histone-binding protein RBBP4.
   
 0.609
WDR73
WD repeat-containing protein 73.
   
 0.609
FANCM
Fanconi anemia group M protein.
    
 0.592
LOC110477051
Fanconi anemia group M protein.
    
 0.592
MTA2
Metastasis associated 1 family member 2.
   
 0.582
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.