Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
XCR1Chemokine XC receptor 1. (334 aa)    
Predicted Functional Partners:
LOC110480732
SCY domain-containing protein.
   
 
 0.963
BATF3
Basic leucine zipper transcriptional factor ATF-like 3.
      
 0.680
CD4
T-cell surface glycoprotein CD4.
   
  
 0.552
FLT3
Fms related tyrosine kinase 3.
      
 0.529
LY75
Lymphocyte antigen 75.
     
 0.470
CD86
T-lymphocyte activation antigen CD86.
   
  
 0.457
SLC6A20
Sodium-and chloride-dependent transporter XTRP3.
      
 0.450
FYCO1
FYVE and coiled-coil domain-containing protein 1.
      
 0.442
CLDN23
Claudin-23.
      
 0.440
LZTFL1
Leucine zipper transcription factor-like protein 1.
     
 0.434
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.