STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RBM14RNA-binding protein 14. (725 aa)    
Predicted Functional Partners:
TAF6L
TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor subunit 6L.
      
 0.704
LOC110467861
RNA-binding protein 8A.
   
 
 0.651
LOC110467863
RNA-binding protein 8A.
   
 
 0.651
L3MBTL2
Lethal(3)malignant brain tumor-like protein 2.
      
 0.610
RBM23
Putative RNA-binding protein 23.
   
 
 0.581
RBM39
RNA-binding protein 39.
   
 
 0.581
RANBP1
Ran-specific GTPase-activating protein.
   
  
 0.577
TFAP4
Transcription factor AP-4.
      
 0.575
ALYREF
THO complex subunit 4.
   
 
 0.573
TOMM34
Mitochondrial import receptor subunit TOM34.
      
 0.572
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.