Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FYCO1FYVE and coiled-coil domain-containing protein 1. (1545 aa)    
Predicted Functional Partners:
RAB7A
Ras-related protein Rab-7a.
    
 0.921
KLC4
Kinesin light chain 4.
    
 0.919
KLC1
Kinesin light chain 1.
    
 0.913
KIF5B
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.911
KIF5C
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.911
RAB7B
Ras-related protein Rab-7b.
     
 0.900
SASS6
Spindle assembly abnormal protein 6.
    
 
 0.880
SCAMP1
Secretory carrier-associated membrane protein.
      
 0.763
STARD3NL
MLN64 N-terminal domain.
      
 0.678
MAP1LC3A
Microtubule-associated proteins 1A/1B light chain 3A.
   
 
 0.673
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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