Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSLSDP00000007978T-cell surface glycoprotein CD7. (197 aa)    
Predicted Functional Partners:
CD2
T-cell surface antigen CD2.
   
  
 0.674
CD5
T-cell differentiation antigen CD6.
   
  
 0.609
CD247
CD247 molecule.
   
  
 0.584
LOC110480163
Ig-like domain-containing protein.
   
  
 0.548
ENSLSDP00000002266
annotation not available
   
  
 0.504
CD3E
T-cell surface glycoprotein CD3 epsilon chain.
   
  
 0.494
ANPEP
Aminopeptidase N.
      
 0.469
ENSLSDP00000005170
annotation not available
   
  
 0.467
CD4
T-cell surface glycoprotein CD4.
      
 0.447
PIK3R2
Phosphatidylinositol 3-kinase regulatory subunit beta.
    
   0.413
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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