Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SUN2SUN domain-containing protein 2. (714 aa)    
Predicted Functional Partners:
SUN1
SUN domain-containing protein 1.
    
0.973
SYNE3
Nesprin-3.
    
 0.935
BTRC
F-box/WD repeat-containing protein 1A.
    
 
 0.926
FBXW11
F-box/WD repeat-containing protein 11.
    
 
 0.925
SYNE2
Nesprin-2.
    
 0.906
SYNE1-2
Nesprin-1.
    
 0.906
SYNE1
Spectrin repeat containing nuclear envelope protein 1.
    
 0.906
LRMP
Lymphoid-restricted membrane protein.
    
 
 0.870
LMNB1
Lamin-B1; Belongs to the intermediate filament family.
    
 0.832
LMNB2
Lamin-B2; Belongs to the intermediate filament family.
    
 0.832
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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