Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
GALK1Galactokinase. (408 aa)    
Predicted Functional Partners:
GALT
Galactose-1-phosphate uridylyltransferase.
 0.999
GALM
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
 
 0.998
GALE
UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
  
 0.981
BRS3
[Phe13]-bombesin receptor; Belongs to the G-protein coupled receptor 1 family.
      
 0.874
KDM6A
Lysine-specific demethylase 6A.
   
 
 0.769
UGP2
UTP--glucose-1-phosphate uridylyltransferase.
  
 
 0.731
DHDH
Trans-1,2-dihydrobenzene-1,2-diol dehydrogenase.
  
 
 0.730
BFSP1
Filensin.
      
 0.708
KDM6B
Lysine-specific demethylase 6B.
   
 
 0.700
NANS
Sialic acid synthase.
      
 0.661
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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