Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CX3CR1CX3C chemokine receptor 1; Belongs to the G-protein coupled receptor 1 family. (353 aa)    
Predicted Functional Partners:
LOC110476305
SCY domain-containing protein.
    
 0.998
LOC110475885
C-C motif chemokine.
   
 0.730
LOC110477148
Triggering receptor expressed on myeloid cells 2.
   
  
 0.713
CD4
T-cell surface glycoprotein CD4.
   
 
 0.711
LOC110475883
C-C motif chemokine 4.
   
 0.590
TMEM119
Transmembrane protein 119.
   
  
 0.583
CXCL12
Stromal cell-derived factor 1; Belongs to the intercrine alpha (chemokine CxC) family.
    
 0.522
IL1B
Interleukin-1; Belongs to the IL-1 family.
      
 0.511
C1QB
Complement C1q subcomponent subunit B.
   
 
 0.500
C1QA
Complement C1q subcomponent subunit A.
   
 
 0.497
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.