STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC25A38Mitochondrial glycine transporter; Mitochondrial glycine transporter that imports glycine into the mitochondrial matrix. Plays an important role in providing glycine for the first enzymatic step in heme biosynthesis, the condensation of glycine with succinyl-CoA to produce 5-aminolevulinate (ALA) in the miochondrial matrix. Required during erythropoiesis. Belongs to the mitochondrial carrier (TC 2.A.29) family. SLC25A38 subfamily. (288 aa)    
Predicted Functional Partners:
PPOX
Protoporphyrinogen oxidase.
      
 0.611
UROS
Uroporphyrinogen-III synthase.
   
  
 0.593
GLRX5
Glutaredoxin-related protein 5, mitochondrial.
      
 0.581
ABCB6
ATP-binding cassette sub-family B member 6, mitochondrial.
      
 0.556
SLC25A26
S-adenosylmethionine mitochondrial carrier protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
    
 
0.555
ABCB7
ATP-binding cassette sub-family B member 7, mitochondrial.
      
 0.544
UROD
Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family.
      
 0.541
CPOX
Oxygen-dependent coproporphyrinogen-III oxidase, mitochondrial.
      
 0.507
FECH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
      
 0.499
CLPX
ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial.
    
 
 0.469
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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