Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CARD19Bcl10-interacting CARD protein. (165 aa)    
Predicted Functional Partners:
MTX2
Metaxin-2.
    
   0.922
CHCHD3
MICOS complex subunit; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.
    
   0.718
FAM3B
Protein FAM3B.
    
   0.695
ABTB1
Ankyrin repeat and BTB/POZ domain-containing protein 1.
      
 0.685
MICOS13
MICOS complex subunit MIC13; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.
      
 0.610
TRAK2
Trafficking kinesin-binding protein 2.
    
   0.593
RHBDD2
Rhomboid domain-containing protein 2.
      
 0.593
ASB5
Ankyrin repeat and SOCS box protein 5.
      
 0.584
BUD13
BUD13.
      
 0.571
CCDC85A
Coiled-coil domain-containing protein 85A.
      
 0.570
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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