STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TAF6LTAF6-like RNA polymerase II p300/CBP-associated factor-associated factor subunit 6L. (557 aa)    
Predicted Functional Partners:
SUPT20H
Transcription factor SPT20.
    
 0.973
TAF12
Transcription initiation factor TFIID subunit 12.
   
 0.970
SUPT7L
STAGA complex 65 subunit gamma.
    
 0.968
SUPT3H
Transcription initiation protein SPT3.
    
 0.967
LOC110474354
Transcription initiation factor TFIID subunit 9.
   
 0.967
TAF10
Transcription initiation factor TFIID subunit 10.
    
 0.958
TRRAP
Transformation/transcription domain-associated protein; Belongs to the PI3/PI4-kinase family.
   
 0.946
ATXN7
Ataxin-7.
   
 0.934
TAF8
Transcription initiation factor TFIID subunit 8.
    
 0.913
TAF2
Transcription initiation factor TFIID subunit 2.
    
 0.911
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.