STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CFAP44Cilia-and flagella-associated protein 44. (1757 aa)    
Predicted Functional Partners:
CFAP43
Cilia-and flagella-associated protein 43.
      
0.661
WDR19
WD repeat-containing protein 19.
   
 0.640
MAD2L1
Mitotic spindle assembly checkpoint protein MAD2A.
   
 0.601
ERICH3
Glutamate-rich protein 3.
   
  0.598
TAF12
Transcription initiation factor TFIID subunit 12.
   
 0.581
LOC110474354
Transcription initiation factor TFIID subunit 9.
    
 0.580
TAF10
Transcription initiation factor TFIID subunit 10.
    
 0.579
TAF2
Transcription initiation factor TFIID subunit 2.
    
 0.572
IFT140
Intraflagellar transport protein 140.
    
 0.567
CDC16
Cell division cycle protein 16.
   
 0.566
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.