ILDR1 protein (Lonchura striata) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ILDR1

Immunoglobulin-like domain-containing receptor 1. (540 aa)

Predicted Functional Partners:

LRRC52

0.710

CLDN12

0.593

GRXCR1

0.568

CLDN14

0.568

MARVELD2

0.542

IER5L

0.535

LRIT1

0.524

LRIT3

0.518

NAA25

0.509

WFIKKN1

0.482

Your Current Organism:

Lonchura striata

NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CLDN12	CLDN14	ENSLSDP00000006661	ENSLSDP00000011178	Claudin-12.	Claudin-14.	0.839
CLDN12	ILDR1	ENSLSDP00000006661	ENSLSDP00000008136	Claudin-12.	Immunoglobulin-like domain-containing receptor 1.	0.593
CLDN12	MARVELD2	ENSLSDP00000006661	ENSLSDP00000025158	Claudin-12.	MARVEL domain-containing protein 2.	0.417
CLDN14	CLDN12	ENSLSDP00000011178	ENSLSDP00000006661	Claudin-14.	Claudin-12.	0.839
CLDN14	ILDR1	ENSLSDP00000011178	ENSLSDP00000008136	Claudin-14.	Immunoglobulin-like domain-containing receptor 1.	0.568
GRXCR1	ILDR1	ENSLSDP00000000134	ENSLSDP00000008136	Glutaredoxin domain-containing cysteine-rich protein 1.	Immunoglobulin-like domain-containing receptor 1.	0.568
IER5L	ILDR1	ENSLSDP00000004111	ENSLSDP00000008136	Immediate early response gene 5-like protein.	Immunoglobulin-like domain-containing receptor 1.	0.535
IER5L	NAA25	ENSLSDP00000004111	ENSLSDP00000007477	Immediate early response gene 5-like protein.	N-alpha-acetyltransferase 25, NatB auxiliary subunit.	0.556
ILDR1	CLDN12	ENSLSDP00000008136	ENSLSDP00000006661	Immunoglobulin-like domain-containing receptor 1.	Claudin-12.	0.593
ILDR1	CLDN14	ENSLSDP00000008136	ENSLSDP00000011178	Immunoglobulin-like domain-containing receptor 1.	Claudin-14.	0.568
ILDR1	GRXCR1	ENSLSDP00000008136	ENSLSDP00000000134	Immunoglobulin-like domain-containing receptor 1.	Glutaredoxin domain-containing cysteine-rich protein 1.	0.568
ILDR1	IER5L	ENSLSDP00000008136	ENSLSDP00000004111	Immunoglobulin-like domain-containing receptor 1.	Immediate early response gene 5-like protein.	0.535
ILDR1	LRIT1	ENSLSDP00000008136	ENSLSDP00000011746	Immunoglobulin-like domain-containing receptor 1.	Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1.	0.524
ILDR1	LRIT3	ENSLSDP00000008136	ENSLSDP00000017571	Immunoglobulin-like domain-containing receptor 1.	Visual pigment-like receptor peropsin; Belongs to the G-protein coupled receptor 1 family.	0.518
ILDR1	LRRC52	ENSLSDP00000008136	ENSLSDP00000013145	Immunoglobulin-like domain-containing receptor 1.	Leucine-rich repeat-containing protein 52.	0.710
ILDR1	MARVELD2	ENSLSDP00000008136	ENSLSDP00000025158	Immunoglobulin-like domain-containing receptor 1.	MARVEL domain-containing protein 2.	0.542
ILDR1	NAA25	ENSLSDP00000008136	ENSLSDP00000007477	Immunoglobulin-like domain-containing receptor 1.	N-alpha-acetyltransferase 25, NatB auxiliary subunit.	0.509
ILDR1	WFIKKN1	ENSLSDP00000008136	ENSLSDP00000001667	Immunoglobulin-like domain-containing receptor 1.	WAP, Kazal, immunoglobulin, Kunitz and NTR domain-containing protein 1.	0.482
LRIT1	ILDR1	ENSLSDP00000011746	ENSLSDP00000008136	Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1.	Immunoglobulin-like domain-containing receptor 1.	0.524
LRIT1	WFIKKN1	ENSLSDP00000011746	ENSLSDP00000001667	Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1.	WAP, Kazal, immunoglobulin, Kunitz and NTR domain-containing protein 1.	0.446