Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TBCDTubulin-specific chaperone D. (1195 aa)    
Predicted Functional Partners:
TBCC
Tubulin-specific chaperone C.
    
 0.982
ARL2
ADP-ribosylation factor-like protein 2.
    
 0.967
TBCE
Tubulin-specific chaperone E.
    
 0.964
TBCB
Tubulin-folding cofactor B.
    
 0.950
TBCA
Tubulin-specific chaperone A; Belongs to the TBCA family.
    
 0.928
WNT9A
Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.
      
 0.873
PFDN4
Prefoldin subunit 4; Binds specifically to cytosolic chaperonin (c-CPN) and transfers target proteins to it. Binds to nascent polypeptide chain and promotes folding in an environment in which there are many competing pathways for nonnative proteins; Belongs to the prefoldin subunit beta family.
    
 
 0.870
MAD1L1
Mitotic spindle assembly checkpoint protein MAD1.
   
 
 0.862
MAD2L1
Mitotic spindle assembly checkpoint protein MAD2A.
    
 
 0.851
KIF17
Kinesin-like protein KIF17; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 
 0.834
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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