STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PARP9Poly [ADP-ribose] polymerase. (802 aa)    
Predicted Functional Partners:
LOC110475866
Interferon-induced GTP-binding protein Mx; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
   
  
 0.758
DTX3L
E3 ubiquitin-protein ligase DTX3L.
   
 0.753
EPSTI1
Epithelial stromal interaction 1.
   
  
 0.716
IFI35
Interferon-induced protein.
   
  
 0.715
DDX58
Putative ATP-dependent RNA helicase DDX58.
   
 
 0.701
LOC110468277
Poly [ADP-ribose] polymerase.
   
 
0.627
PARP3
Poly [ADP-ribose] polymerase.
    
 
 0.564
RSAD2
Radical S-adenosyl methionine domain-containing protein 2.
   
 
 0.536
LOC110480607
Poly [ADP-ribose] polymerase.
  
 
0.527
CMPK2
UMP-CMP kinase 2, mitochondrial.
  
  
 0.503
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.