STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDC42EP2CDC42 effector protein 2. (162 aa)    
Predicted Functional Partners:
CDC42
Cell division control protein 42.
    
 0.726
CDC42EP4
CDC42 effector protein 4.
     
0.584
RHOQ
Rho-related GTP-binding protein RhoQ.
    
 0.540
RHOJ
Rho-related GTP-binding protein RhoJ.
    
 0.540
FAM89A
Protein FAM89A.
      
 0.516
RHOH
Rho-related GTP-binding protein RhoH.
    
 0.491
SEPTIN10
Septin-10; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.
    
 
 0.458
ARHGAP26
Rho GTPase-activating protein 26.
    
   0.430
RASL11B
Ras-like protein family member 11B.
    
 0.410
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.