Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CDC42EP2CDC42 effector protein 2. (162 aa)    
Predicted Functional Partners:
CDC42
Cell division control protein 42.
    
 0.944
ARHGAP26
Rho GTPase-activating protein 26.
    
   0.856
CDC42EP3
Cdc42 effector protein 3.
     
  0.719
RHOQ
Rho-related GTP-binding protein RhoQ.
    
 0.685
RHOJ
Rho-related GTP-binding protein RhoJ.
    
 0.685
RHOH
Rho-related GTP-binding protein RhoH.
    
 0.619
CDC42EP4
CDC42 effector protein 4.
   
 
 0.580
ENSLSDP00000002021
annotation not available
     
 0.572
SEPTIN10
Septin-10; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.
    
 
 0.541
FAM89A
Protein FAM89A.
      
 0.541
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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