STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSNK1ECasein kinase I isoform epsilon; Belongs to the protein kinase superfamily. (416 aa)    
Predicted Functional Partners:
LTV1
Protein LTV1.
    
 0.963
AXIN1
Axin-1.
    
 0.951
AXIN2
Axin-2.
    
 0.951
PRKACB
cAMP-dependent protein kinase catalytic subunit beta; Belongs to the protein kinase superfamily.
   
0.928
SMO
Smoothened; Belongs to the G-protein coupled receptor Fz/Smo family.
    
  0.905
FOXO3
Forkhead box protein O3.
    
  0.902
FOXO4
Forkhead box protein O4.
    
  0.902
FOXO1
Forkhead box protein O1.
    
  0.902
FOXO6
Forkhead box protein O3.
    
  0.902
GRK2
G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily.
     
  0.900
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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