STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM184BTransmembrane protein 184B. (439 aa)    
Predicted Functional Partners:
GABARAP
Gamma-aminobutyric acid receptor-associated protein.
    
   0.558
GABARAPL2
Gamma-aminobutyric acid receptor-associated protein-like 2.
    
   0.558
GABARAPL1
Gamma-aminobutyric acid receptor-associated protein-like 1.
    
   0.558
RPP40
Ribonuclease P protein subunit p40.
    
 
 0.533
RPL37A
60S ribosomal protein L37a.
      
 0.525
DOK4
Docking protein 4.
      
 0.519
KCTD14
BTB/POZ domain-containing protein KCTD14.
      
 0.512
DPY30
Protein dpy-30.
    
   0.483
KCTD2
BTB/POZ domain-containing protein KCTD2.
    
   0.483
UBE2I
SUMO-conjugating enzyme UBC9; Belongs to the ubiquitin-conjugating enzyme family.
    
   0.483
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.