STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRAMD1CGRAM domain-containing protein 1C. (619 aa)    
Predicted Functional Partners:
RLOC_00011362
Uncharacterized protein.
 
  
   0.614
GTPBP8
GTP-binding protein 8.
      
 0.605
TTC37
Tetratricopeptide repeat protein 37.
      
 0.577
LOC110470450
Myelin protein zero-like protein 3.
    
 0.546
SCN2B
Sodium channel subunit beta-2.
    
 0.546
SPICE1
Spindle and centriole-associated protein 1.
      
 0.527
ANTXRL
Anthrax toxin receptor; Belongs to the ATR family.
    
 
 0.509
TRIAP1
TP53-regulated inhibitor of apoptosis 1.
      
 0.499
C12orf66
UPF0536 protein C12orf66.
      
 0.489
TMEM205
Transmembrane protein 205.
      
 0.457
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.