Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
YTHDF1YTH domain-containing family protein 1. (561 aa)    
Predicted Functional Partners:
METTL14
N6-adenosine-methyltransferase subunit METTL14; Belongs to the MT-A70-like family.
  
 
 
 0.908
WTAP
Pre-mRNA-splicing regulator WTAP.
   
  
 0.880
G3BP1
Ras GTPase-activating protein-binding protein 1.
   
 
 0.877
PRRC2B
Protein PRRC2B.
    
 
 0.875
ALKBH5
RNA demethylase ALKBH5.
      
 0.874
FTO
Alpha-ketoglutarate-dependent dioxygenase FTO.
      
 0.873
PRRC2C
Protein PRRC2C.
    
 
 0.862
RPL3
60S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
   
 
 0.861
YTHDF2
YTH domain-containing family protein 2.
   
 
 0.818
YTHDF3
YTH domain-containing family protein 3.
   
 
 0.818
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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