STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ETV6Transcription factor ETV6. (466 aa)    
Predicted Functional Partners:
ZNF384
Zinc finger protein 384.
    
 
 0.677
NTRK3
Tyrosine-protein kinase receptor.
    
 0.571
PDGFRB
Platelet-derived growth factor receptor beta; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily.
    
 0.554
ENSLSDP00000012102
annotation not available
    
 
 0.534
TBP
TATA-box-binding protein.
    
 
 0.534
IKZF1
DNA-binding protein Ikaros.
    
 
 0.523
CBFB
Core-binding factor subunit beta.
     
 0.463
FLT3
Fms related tyrosine kinase 3.
    
 0.462
RUNX3
Runt-related transcription factor 3.
    
 0.447
RUNX1
Runt-related transcription factor 1.
    
 0.447
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.