STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC1104826546-phosphofructo-2-kinase/fructose-2, 6-bisphosphatase. (497 aa)    
Predicted Functional Partners:
GPI
Glucose-6-phosphate isomerase; Belongs to the GPI family.
    
 0.615
GAPDH
Glyceraldehyde-3-phosphate dehydrogenase.
    
 0.607
CSTF3
Cleavage stimulation factor subunit 3.
     
 0.586
PSAT1
Phosphoserine aminotransferase.
    
 0.583
H6PD
GDH/6PGL endoplasmic bifunctional protein.
  
  
 0.563
TPI1
Triosephosphate isomerase.
   
 
 0.518
AGXT
Serine--pyruvate aminotransferase.
  
 
 0.513
ENOPH1
Enolase-phosphatase E1; Bifunctional enzyme that catalyzes the enolization of 2,3- diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P) into the intermediate 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate (HK- MTPenyl-1-P), which is then dephosphorylated to form the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene).
     
 0.510
PGK1
Phosphoglycerate kinase.
  
 
 0.510
TIGAR
Fructose-2,6-bisphosphatase TIGAR.
    
 0.494
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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