Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
IGSF11Immunoglobulin superfamily member 11 isoform X1. (471 aa)    
Predicted Functional Partners:
VSIR
Platelet receptor Gi24.
     
 0.929
MC1R
Melanocortin 1 receptor.
      
 0.744
KITLG
Kit ligand; Ligand for the receptor-type protein-tyrosine kinase KIT. Plays an essential role in the regulation of cell survival and proliferation, hematopoiesis, stem cell maintenance, gametogenesis, mast cell development, migration and function, and in melanogenesis. Belongs to the SCF family.
      
 0.711
SOX10
Transcription factor SOX-10.
      
 0.709
LRFN2
Leucine-rich repeat and fibronectin type-III domain-containing protein 2.
      
 0.659
IGSF5
Immunoglobulin superfamily member 5.
  
   
 0.657
SLC16A3
Monocarboxylate transporter 4.
      
 0.640
MPV17
Protein Mpv17; Belongs to the peroxisomal membrane protein PXMP2/4 family.
   
  
 0.572
DNAJC24
DnaJ subfamily C member 24.
      
 0.567
GJA5
Gap junction alpha-5 protein.
      
 0.561
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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