LOC110482648 protein (Lonchura striata) - STRING interaction network

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second shell of interactors

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

LOC110482648

Barrier-to-autointegration factor. (90 aa)

Predicted Functional Partners:

ANKLE2

0.794

LEMD3

0.777

LMNB2

0.728

LMNB1

0.713

LMNA

0.713

LOC110474273

0.671

VRK1

0.662

VRK2

0.662

RBM23

0.646

RBM39

0.646

Your Current Organism:

Lonchura striata

NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ANKLE2	LEMD3	ENSLSDP00000018471	ENSLSDP00000022853	Ankyrin repeat and LEM domain-containing protein 2.	Inner nuclear membrane protein Man1.	0.420
ANKLE2	LOC110482648	ENSLSDP00000018471	ENSLSDP00000008341	Ankyrin repeat and LEM domain-containing protein 2.	Barrier-to-autointegration factor.	0.794
ANKLE2	RBM23	ENSLSDP00000018471	ENSLSDP00000004637	Ankyrin repeat and LEM domain-containing protein 2.	Putative RNA-binding protein 23.	0.416
ANKLE2	RBM39	ENSLSDP00000018471	ENSLSDP00000012934	Ankyrin repeat and LEM domain-containing protein 2.	RNA-binding protein 39.	0.416
ANKLE2	VRK1	ENSLSDP00000018471	ENSLSDP00000011137	Ankyrin repeat and LEM domain-containing protein 2.	Serine/threonine-protein kinase VRK1; Belongs to the protein kinase superfamily.	0.827
ANKLE2	VRK2	ENSLSDP00000018471	ENSLSDP00000011915	Ankyrin repeat and LEM domain-containing protein 2.	Serine/threonine-protein kinase VRK2.	0.827
LEMD3	ANKLE2	ENSLSDP00000022853	ENSLSDP00000018471	Inner nuclear membrane protein Man1.	Ankyrin repeat and LEM domain-containing protein 2.	0.420
LEMD3	LMNA	ENSLSDP00000022853	ENSLSDP00000023350	Inner nuclear membrane protein Man1.	Lamin-A; Belongs to the intermediate filament family.	0.654
LEMD3	LMNB1	ENSLSDP00000022853	ENSLSDP00000012227	Inner nuclear membrane protein Man1.	Lamin-B1; Belongs to the intermediate filament family.	0.654
LEMD3	LMNB2	ENSLSDP00000022853	ENSLSDP00000020531	Inner nuclear membrane protein Man1.	Lamin-B2; Belongs to the intermediate filament family.	0.654
LEMD3	LOC110474273	ENSLSDP00000022853	ENSLSDP00000024533	Inner nuclear membrane protein Man1.	Lamin-L(III); Belongs to the intermediate filament family.	0.654
LEMD3	LOC110482648	ENSLSDP00000022853	ENSLSDP00000008341	Inner nuclear membrane protein Man1.	Barrier-to-autointegration factor.	0.777
LMNA	LEMD3	ENSLSDP00000023350	ENSLSDP00000022853	Lamin-A; Belongs to the intermediate filament family.	Inner nuclear membrane protein Man1.	0.654
LMNA	LOC110482648	ENSLSDP00000023350	ENSLSDP00000008341	Lamin-A; Belongs to the intermediate filament family.	Barrier-to-autointegration factor.	0.713
LMNA	RBM23	ENSLSDP00000023350	ENSLSDP00000004637	Lamin-A; Belongs to the intermediate filament family.	Putative RNA-binding protein 23.	0.417
LMNA	RBM39	ENSLSDP00000023350	ENSLSDP00000012934	Lamin-A; Belongs to the intermediate filament family.	RNA-binding protein 39.	0.417
LMNB1	LEMD3	ENSLSDP00000012227	ENSLSDP00000022853	Lamin-B1; Belongs to the intermediate filament family.	Inner nuclear membrane protein Man1.	0.654
LMNB1	LOC110482648	ENSLSDP00000012227	ENSLSDP00000008341	Lamin-B1; Belongs to the intermediate filament family.	Barrier-to-autointegration factor.	0.713
LMNB1	RBM23	ENSLSDP00000012227	ENSLSDP00000004637	Lamin-B1; Belongs to the intermediate filament family.	Putative RNA-binding protein 23.	0.417
LMNB1	RBM39	ENSLSDP00000012227	ENSLSDP00000012934	Lamin-B1; Belongs to the intermediate filament family.	RNA-binding protein 39.	0.417