STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM83HProtein FAM83H. (1086 aa)    
Predicted Functional Partners:
LAMB3
Laminin subunit beta 3.
      
 0.660
VRK3
Inactive serine/threonine-protein kinase VRK3-like.
    
 
 0.628
TTBK2
Tau-tubulin kinase 2.
    
 
 0.600
VRK2
Serine/threonine-protein kinase VRK2.
    
 
 0.572
COL17A1
Collagen type XVII alpha 1 chain.
      
 0.569
FAM20A
Protein FAM20A.
      
 0.561
CSNK1A1
Casein kinase I isoform alpha; Belongs to the protein kinase superfamily.
    
 
 0.553
DLX3
Homeobox protein DLX-3.
      
 0.548
STIM1
Stromal interaction molecule 1.
      
 0.536
WDR81
WD repeat-containing protein 81.
      
 0.457
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.