Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TSPAN33Tetraspanin-33; Belongs to the tetraspanin (TM4SF) family. (198 aa)    
Predicted Functional Partners:
TM6SF1
Transmembrane 6 superfamily member 1.
      
 0.706
CCDC186
Coiled-coil domain-containing protein 186.
      
 0.595
TMEM182
Transmembrane protein 182.
      
 0.589
POLD2
DNA polymerase delta subunit 2.
      
 0.567
FBLN5
Fibulin-5.
     
 0.540
EXO1
Exonuclease 1.
      
 0.534
TSG101
Tumor susceptibility gene 101 protein.
      
 0.526
IFI30
Gamma-interferon-inducible lysosomal thiol reductase.
      
 0.517
CIDEC
Cell death activator CIDE-3.
      
 0.511
MSL3
Male-specific lethal 3.
      
 0.502
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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