STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF1A2Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (463 aa)    
Predicted Functional Partners:
EEF1G
Elongation factor 1-gamma.
   
 0.999
EEF1B2
Elongation factor 1-beta; Belongs to the EF-1-beta/EF-1-delta family.
   
 0.983
ENSLSDP00000008068
annotation not available
   
 0.951
RAN
GTP-binding nuclear protein Ran; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
   
 
 0.945
RPS3
40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
   
 0.943
RPS2
40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
   
 0.925
EEF1D
Elongation factor 1-delta; Belongs to the EF-1-beta/EF-1-delta family.
   
 0.920
PAPSS2
Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 2.
 
    
 0.906
EEF1A1
Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
  
  
 
0.900
PAPSS1
Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 1.
 
    
 0.899
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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