STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PICK1PRKCA-binding protein. (425 aa)    
Predicted Functional Partners:
GRIA2
Glutamate receptor 2.
    
 0.889
ENSLSDP00000024821
annotation not available
    
 0.889
TSPAN7
Tetraspanin.
     
 0.886
GRIA3
Glutamate receptor 3.
    
 0.870
GRIP1
Glutamate receptor-interacting protein 1.
    
 0.855
GRIA1
Glutamate receptor 1.
    
 0.821
GRIP2
Glutamate receptor-interacting protein 2.
    
 0.818
GRIA4
Glutamate receptor 4 isoform X1.
    
 0.786
NSF
Vesicle-fusing ATPase.
   
 
 0.783
ICA1
Islet cell autoantigen 1.
    
 
 0.701
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.