STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SRMSTyrosine-protein kinase. (429 aa)    
Predicted Functional Partners:
LYN
Tyrosine-protein kinase.
  
0.718
KHDRBS1
KH domain-containing, RNA-binding, signal transduction-associated protein 1.
    
 0.696
BCAR1
Breast cancer anti-estrogen resistance protein 1.
   
 0.678
CBL
E3 ubiquitin-protein ligase CBL.
    
 0.641
CBLB
E3 ubiquitin-protein ligase CBL-B.
    
 0.641
SH2D1A
SH2 domain-containing protein 1A.
   
 0.623
CD4
T-cell surface glycoprotein CD4.
   
 0.622
SOCS3
Suppressor of cytokine signaling 3.
   
 0.618
CSK
Tyrosine-protein kinase.
  
0.615
PAG1
Phosphoprotein associated with glycosphingolipid-enriched microdomains 1.
    
 0.606
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
Server load: medium (66%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.