STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NHLH2Helix-loop-helix protein 2. (144 aa)    
Predicted Functional Partners:
GDAP2
Ganglioside-induced differentiation-associated protein 2.
      
 0.672
WDR3
WD repeat-containing protein 3.
      
 0.672
PTGFRN
Prostaglandin F2 receptor negative regulator.
      
 0.672
IGSF3
Immunoglobulin superfamily, member 2/3.
      
 0.672
GSC
Homeobox protein goosecoid.
    
 0.583
PCSK1
Neuroendocrine convertase 1; Belongs to the peptidase S8 family.
      
 0.515
ENSLSDP00000003757
annotation not available
    
 0.480
LOC110484130
Transcription factor 4.
    
 0.480
TCF3
Transcription factor E2-alpha.
    
 0.480
TCF12
Transcription factor 12.
    
 0.480
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.