Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOXL2Lysyl oxidase 2. (260 aa)    
Predicted Functional Partners:
LOXL3-2
Lysyl oxidase 3.
 
   
  0.916
ENSLSDP00000008454
annotation not available
 
      0.893
LOXL4
Lysyl oxidase 4.
    
  0.649
MFAP4
Microfibril-associated glycoprotein 4.
    
 0.442
DHX15
Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15.
    
  0.437
NUDCD1
NudC domain-containing protein 1.
    
   0.432
ADGRG6
G-protein coupled receptor 126; Belongs to the G-protein coupled receptor 2 family.
      
 0.416
ADGRG2
Adhesion G protein-coupled receptor G2.
      
 0.416
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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