Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SLC35F5Solute carrier family 35 member F5. (480 aa)    
Predicted Functional Partners:
SLC22A15
Solute carrier family 22 member 15.
      
 0.671
SLC7A2
Cationic amino acid transporter 2.
   
  
 0.650
SLC7A2-2
Cationic amino acid transporter 2.
   
  
 0.567
SLC19A2
Thiamine transporter 1.
      
 0.558
SLC35G2
Solute carrier family 35 member G2.
      
 0.558
TMX3
Protein disulfide-isomerase TMX3.
      
 0.557
SLC4A1AP
Kanadaptin.
      
 0.554
SLC10A7
Sodium/bile acid cotransporter 7.
      
 0.532
SLC39A13
Zinc transporter ZIP13.
   
  
 0.527
CPZ
Carboxypeptidase Z.
      
 0.502
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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