Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CD58Lymphocyte function-associated antigen 3. (331 aa)    
Predicted Functional Partners:
CD2
T-cell surface antigen CD2.
    
 0.999
LOC110480163
Ig-like domain-containing protein.
    
 0.971
SPG21
Maspardin.
      
 0.708
SAMSN1
SAM domain-containing protein SAMSN-1.
   
  
 0.708
CD80
T-lymphocyte activation antigen CD80.
      
 0.567
GDAP2
Ganglioside-induced differentiation-associated protein 2.
      
 0.565
FANCM
Fanconi anemia group M protein.
    
 0.529
LOC110477051
Fanconi anemia group M protein.
    
 0.529
LOC110481375
Serotransferrin-2.
      
 0.486
LOC110476475
Ovotransferrin; Belongs to the transferrin family.
      
 0.486
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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