STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPIDPeptidyl-prolyl cis-trans isomerase D. (360 aa)    
Predicted Functional Partners:
SLC25A5
ADP/ATP translocase 2; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
 0.929
SLC25A4
ADP/ATP translocase 1; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
 0.929
SLC25A6
ADP/ATP translocase 3; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
 0.929
VDAC1
Voltage-dependent anion-selective channel protein 1.
   
 0.911
PTGES3
Prostaglandin E synthase 3.
   
 0.911
VDAC2
Voltage-dependent anion-selective channel protein 2.
   
 0.841
VDAC3
Voltage-dependent anion-selective channel protein 3.
   
 0.841
PTGES3L
CS domain-containing protein.
   
 0.799
LOC110476439
Heat shock protein HSP 90-alpha.
   
 0.791
LOC110481174
Heat shock protein HSP 90-alpha.
   
 0.791
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
Server load: low (8%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.