STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H1-0Histone H5. (192 aa)    
Predicted Functional Partners:
KPNB1
Importin subunit beta-1.
    
   0.873
DFFB
DNAation factor subunit beta.
    
 0.761
CDK1
Cyclin-dependent kinase 1; Belongs to the protein kinase superfamily.
   
 0.677
GGA2
ADP-ribosylation factor-binding protein GGA2.
      
 0.671
GGA1
ADP-ribosylation factor-binding protein GGA1.
      
 0.669
PTMA
Prothymosin alpha.
    
 
 0.663
CDK2
Cyclin dependent kinase 2.
   
 0.632
CDK3
Cyclin-dependent kinase 3; Belongs to the protein kinase superfamily.
   
 0.632
ENSLSDP00000001290
annotation not available
   
 0.631
ENSLSDP00000002615
annotation not available
   
 0.631
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.