Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SMPXSmall muscular protein. (84 aa)    
Predicted Functional Partners:
MYOZ2
Myozenin-2.
   
  
 0.727
CSRP3
Cysteine and glycine-rich protein 3.
   
  
 0.726
ITGB1BP2
Cysteine and histidine-rich domain-containing protein 1.
   
  
 0.701
ACTN2
Alpha-actinin-2.
   
  
 0.685
TSPEAR
Thrombospondin-type laminin G domain and EAR repeat-containing protein.
      
 0.682
MGP
Matrix Gla protein.
      
 0.620
MYOM2
M-protein, striated muscle.
   
  
 0.610
LOC110480025
Myosin regulatory light chain 2, skeletal muscle isoform.
   
  
 0.603
GPSM2
G-protein-signaling modulator 2.
      
 0.597
PRPS2
Ribose-phosphate pyrophosphokinase 2.
      
 0.597
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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