Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LETM2LETM1 domain-containing protein LETM2, mitochondrial. (472 aa)    
Predicted Functional Partners:
FAM118A
Protein FAM118A.
    
 
 0.572
MTFR2
Mitochondrial fission regulator 2.
      
 0.569
LOC110471603
Cytochrome b-c1 complex subunit 1, mitochondrial.
   
 0.552
PMPCB
Mitochondrial-processing peptidase subunit beta; Belongs to the peptidase M16 family.
   
 0.552
PCGF3
Polycomb group RING finger protein 3.
      
 0.548
TMTC1
Transmembrane and TPR repeat-containing protein 1.
      
 0.541
MICU1
Calcium uptake protein 1, mitochondrial.
      
 0.539
CCDC77
Coiled-coil domain-containing protein 77.
    
   0.533
MTUS1
Microtubule-associated tumor suppressor 1.
      
 0.517
EIF3J
Eukaryotic translation initiation factor 3 subunit J.
    
 
 0.511
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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