STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DIXDC1Dixin. (686 aa)    
Predicted Functional Partners:
NDEL1
Nuclear distribution protein nudE-like 1.
    
 
 0.625
DISC1
Disrupted in schizophrenia 1 protein.
    
 
 0.608
CDK13
Cyclin-dependent kinase 13.
    
 
 0.551
CDK12
Cyclin-dependent kinase 12.
    
 
 0.551
CCNT1
Cyclin-T1; Belongs to the cyclin family.
   
 
 0.457
CCNT2
Cyclin-T2; Belongs to the cyclin family.
   
 
 0.457
CCNK
Cyclin-K; Belongs to the cyclin family.
   
 
 0.457
COQ4
Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial; Component of the coenzyme Q biosynthetic pathway. May play a role in organizing a multi-subunit COQ enzyme complex required for coenzyme Q biosynthesis. Required for steady-state levels of other COQ polypeptides; Belongs to the COQ4 family.
      
 0.452
CAMTA1
Calmodulin-binding transcription activator 1.
      
 0.448
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.