Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
RNF157RING finger protein 157. (752 aa)    
Predicted Functional Partners:
PRPSAP1
Phosphoribosyl pyrophosphate synthase-associated protein 1.
      
 0.691
CHD1
Chromodomain-helicase-DNA-binding protein 1.
    
   0.586
SAMD3
Sterile alpha motif domain containing 3.
      
 0.577
MOSMO
Uncharacterized protein C16orf52 B.
    
 
 0.569
UNC45A
Protein unc-45 A.
      
 0.568
UNC45B
Protein unc-45 B.
      
 0.568
FRMD4A
FERM domain-containing protein 4A.
      
 0.565
MEGF8
Multiple epidermal growth factor-like domains protein 8.
   
 
 0.557
ATRN
Attractin.
   
 
 0.557
ATRNL1
Attractin-like protein 1.
   
 
 0.557
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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