STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DNAJC5DnaJ subfamily C member 5. (198 aa)    
Predicted Functional Partners:
RIMS2
Regulating synaptic membrane exocytosis protein 2.
     
 0.939
CDC5L
Cell division cycle 5-like protein.
   
 
 0.780
TFIP11
Tuftelin-interacting protein 11; Involved in pre-mRNA splicing, specifically in spliceosome disassembly during late-stage splicing events. Belongs to the TFP11/STIP family.
    
 
 0.770
HSPA2
Heat shock protein; Belongs to the heat shock protein 70 family.
 
 0.768
HSPA8
Heat shock cognate protein.
 
 0.766
CRNKL1
Crooked neck-like protein 1.
    
 
 0.742
PLRG1
Pleiotropic regulator 1.
    
   0.737
PRPF19
Pre-mRNA-processing factor 19.
    
   0.734
HSPA9
Stress-70 protein, mitochondrial; Belongs to the heat shock protein 70 family.
 
 0.719
HSPA14
Heat shock protein 14; Belongs to the heat shock protein 70 family.
 
 0.703
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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