STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110474841Serine/arginine-rich splicing factor 7. (238 aa)    
Predicted Functional Partners:
NXF1
Nuclear RNA export factor 1.
   
 0.945
SRSF1
Serine/arginine-rich splicing factor 1.
   
0.936
SRSF3
Serine/arginine-rich splicing factor 3.
   
0.925
SRPK1
SRSF protein kinase 1.
    
 0.915
SRSF2
Serine/arginine-rich splicing factor 2.
   
0.891
TRA2B
Transformer-2 beta.
   
 0.887
TRA2A
Transformer-2 alpha.
   
 0.782
U2AF2
Splicing factor U2AF subunit.
   
 0.757
EIF4A3
Eukaryotic initiation factor 4A-III; Belongs to the DEAD box helicase family.
   
 0.729
SNRNP70
U1 small nuclear ribonucleoprotein.
   
0.720
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.