Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC110474841Serine/arginine-rich splicing factor 7. (238 aa)    
Predicted Functional Partners:
SRSF3
Serine/arginine-rich splicing factor 3.
   
 0.995
SRSF1
Serine/arginine-rich splicing factor 1.
   
 0.986
NXF1
Nuclear RNA export factor 1.
   
 0.969
TRA2B
Transformer-2 beta.
   
 0.967
EIF4A3
Eukaryotic initiation factor 4A-III; Belongs to the DEAD box helicase family.
   
 0.925
SRPK1
SRSF protein kinase 1.
    
 0.913
ALYREF
THO complex subunit 4.
   
 0.907
SRSF2
Serine/arginine-rich splicing factor 2.
   
 0.897
TRA2A
Transformer-2 alpha.
   
 0.850
HNRNPC
Heterogeneous nuclear ribonucleoprotein C-like 1.
   
 0.824
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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