STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110470410T-cell surface glycoprotein CD3 gamma chain. (171 aa)    
Predicted Functional Partners:
CD3E
T-cell surface glycoprotein CD3 epsilon chain.
   
 0.998
CD247
CD247 molecule.
   
 0.989
ENSLSDP00000002266
annotation not available
   
 0.911
ZAP70
Tyrosine-protein kinase.
   
 0.899
SYK
Tyrosine-protein kinase.
   
 0.837
CD8B
T-cell surface glycoprotein CD8 beta chain.
   
 
 0.817
LCP2
Lymphocyte cytosolic protein 2.
   
 0.778
CD2
T-cell surface antigen CD2.
   
 0.775
PTPRC
Receptor-type tyrosine-protein phosphatase C.
   
 0.697
LOC110480163
Ig-like domain-containing protein.
   
 0.689
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.