STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110481576Cytochrome P450 3A40; Belongs to the cytochrome P450 family. (520 aa)    
Predicted Functional Partners:
LOC110481678
Cytochrome P450 3A13.
  
 
 
0.944
LOC110479740
Cytochrome P450 1A4; Belongs to the cytochrome P450 family.
  
0.943
LOC110479741
Cytochrome P450 1A5.
  
0.943
CYP7A1
Cholesterol 7-alpha-monooxygenase; Belongs to the cytochrome P450 family.
  
 
 0.942
LOC110480306
Cytochrome P450 2G1.
  
0.938
LOC110474232
Aromatase; Belongs to the cytochrome P450 family.
  
0.936
LOC110477061
Cytochrome P450 family 2 subfamily J.
  
0.936
LOC110475152
Cytochrome P450 2C16; Belongs to the cytochrome P450 family.
  
0.935
LOC110477035
Cytochrome P450 2J6.
  
0.935
LOC110471710
UDP-glucuronosyltransferase 2A2 isoform X1.
   
 0.934
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.