STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSF3Granulocyte colony-stimulating factor. (199 aa)    
Predicted Functional Partners:
CSF3R
Granulocyte colony-stimulating factor receptor.
    
 0.997
PSMD6
26S proteasome non-ATPase regulatory subunit 6.
   
 0.988
PSMD13
26S proteasome non-ATPase regulatory subunit 13.
   
 0.986
PSMD12
26S proteasome non-ATPase regulatory subunit 12.
   
 0.985
PSMD2
26S proteasome non-ATPase regulatory subunit 2; Component of the 26S proteasome, a multiprotein complex involved in the ATP-dependent degradation of ubiquitinated proteins. This complex plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins, which could impair cellular functions, and by removing proteins whose functions are no longer required. Therefore, the proteasome participates in numerous cellular processes, including cell cycle progression, apoptosis, or DNA damage repair; Belongs to the proteasome subunit S2 family.
   
 0.985
PSMC1
26S protease regulatory subunit 4; Belongs to the AAA ATPase family.
   
 0.984
PSMD7
26S proteasome non-ATPase regulatory subunit 7.
   
 0.983
ADRM1
Proteasomal ubiquitin receptor ADRM1.
   
 0.983
PSMD4
26S proteasome non-ATPase regulatory subunit 4.
   
 0.983
PSMC3
26S protease regulatory subunit 6A; Belongs to the AAA ATPase family.
   
 0.983
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.