STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NRGNSperm surface protein Sp17. (143 aa)    
Predicted Functional Partners:
POLD2
DNA polymerase delta subunit 2.
    
 0.586
FANCM
Fanconi anemia group M protein.
    
 0.570
LOC110477051
Fanconi anemia group M protein.
    
 0.570
LOC110475047
Survival motor neuron protein.
    
 0.564
SNRPE
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.500
SNRPF
Small nuclear ribonucleoprotein F.
    
  0.473
DDX20
Putative ATP-dependent RNA helicase DDX20; Belongs to the DEAD box helicase family.
   
 0.471
SNRPG
Small nuclear ribonucleoprotein G.
    
  0.455
WRN
Werner syndrome ATP-dependent helicase.
     
 0.443
NLE1
Notchless 1.
   
 
 0.422
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.