Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
FBXL17 | PJA2 | ENSLSDP00000011333 | ENSLSDP00000011378 | F-box/LRR-repeat protein 17. | E3 ubiquitin-protein ligase Praja-2. | 0.558 |
FBXL17 | RPS27A | ENSLSDP00000011333 | ENSLSDP00000019847 | F-box/LRR-repeat protein 17. | Ubiquitin-40S ribosomal protein S27a. | 0.537 |
LGR4 | LGR5 | ENSLSDP00000018923 | ENSLSDP00000024163 | Leucine-rich repeat-containing G-protein coupled receptor 4. | Leucine-rich repeat-containing G protein-coupled receptor 5. | 0.966 |
LGR4 | PJA2 | ENSLSDP00000018923 | ENSLSDP00000011378 | Leucine-rich repeat-containing G-protein coupled receptor 4. | E3 ubiquitin-protein ligase Praja-2. | 0.537 |
LGR4 | RPS27A | ENSLSDP00000018923 | ENSLSDP00000019847 | Leucine-rich repeat-containing G-protein coupled receptor 4. | Ubiquitin-40S ribosomal protein S27a. | 0.609 |
LGR4 | RSPO1 | ENSLSDP00000018923 | ENSLSDP00000020841 | Leucine-rich repeat-containing G-protein coupled receptor 4. | R-spondin-1. | 0.997 |
LGR4 | RSPO2 | ENSLSDP00000018923 | ENSLSDP00000005802 | Leucine-rich repeat-containing G-protein coupled receptor 4. | R-spondin-2. | 0.964 |
LGR5 | LGR4 | ENSLSDP00000024163 | ENSLSDP00000018923 | Leucine-rich repeat-containing G protein-coupled receptor 5. | Leucine-rich repeat-containing G-protein coupled receptor 4. | 0.966 |
LGR5 | PJA2 | ENSLSDP00000024163 | ENSLSDP00000011378 | Leucine-rich repeat-containing G protein-coupled receptor 5. | E3 ubiquitin-protein ligase Praja-2. | 0.537 |
LGR5 | RPS27A | ENSLSDP00000024163 | ENSLSDP00000019847 | Leucine-rich repeat-containing G protein-coupled receptor 5. | Ubiquitin-40S ribosomal protein S27a. | 0.609 |
LGR5 | RSPO1 | ENSLSDP00000024163 | ENSLSDP00000020841 | Leucine-rich repeat-containing G protein-coupled receptor 5. | R-spondin-1. | 0.994 |
LGR5 | RSPO2 | ENSLSDP00000024163 | ENSLSDP00000005802 | Leucine-rich repeat-containing G protein-coupled receptor 5. | R-spondin-2. | 0.961 |
LOC110471805 | PJA2 | ENSLSDP00000007589 | ENSLSDP00000011378 | Ubiquitin. | E3 ubiquitin-protein ligase Praja-2. | 0.591 |
LOC110471805 | RPS27A | ENSLSDP00000007589 | ENSLSDP00000019847 | Ubiquitin. | Ubiquitin-40S ribosomal protein S27a. | 0.949 |
LOC110471805 | TRIP12 | ENSLSDP00000007589 | ENSLSDP00000020067 | Ubiquitin. | E3 ubiquitin-protein ligase TRIP12. | 0.935 |
MFHAS1 | PJA2 | ENSLSDP00000005671 | ENSLSDP00000011378 | Malignant fibrous histiocytoma-amplified sequence 1. | E3 ubiquitin-protein ligase Praja-2. | 0.595 |
PJA2 | FBXL17 | ENSLSDP00000011378 | ENSLSDP00000011333 | E3 ubiquitin-protein ligase Praja-2. | F-box/LRR-repeat protein 17. | 0.558 |
PJA2 | LGR4 | ENSLSDP00000011378 | ENSLSDP00000018923 | E3 ubiquitin-protein ligase Praja-2. | Leucine-rich repeat-containing G-protein coupled receptor 4. | 0.537 |
PJA2 | LGR5 | ENSLSDP00000011378 | ENSLSDP00000024163 | E3 ubiquitin-protein ligase Praja-2. | Leucine-rich repeat-containing G protein-coupled receptor 5. | 0.537 |
PJA2 | LOC110471805 | ENSLSDP00000011378 | ENSLSDP00000007589 | E3 ubiquitin-protein ligase Praja-2. | Ubiquitin. | 0.591 |
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