STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CENPVCentromere protein V. (219 aa)    
Predicted Functional Partners:
SORD
Sorbitol dehydrogenase.
   
 
 0.829
ADH1C
Alcohol dehydrogenase 1 isoform X2.
    
 0.761
LOC110481580
Alcohol dehydrogenase class-3.
    
 0.761
ADH5
S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase.
    
 0.761
CDCA3
Cell division cycle-associated protein 3.
      
 0.576
CENPQ
Centromere protein Q.
      
 0.567
CCDC181
Coiled-coil domain-containing protein 181.
      
 0.502
MEI4
Meiosis-specific protein MEI4-like.
      
 0.422
LOC110478609
Meiosis-specific protein MEI4-like.
      
 0.422
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.