STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARHGAP29Rho GTPase-activating protein 29. (1326 aa)    
Predicted Functional Partners:
CDC42
Cell division control protein 42.
   
 0.617
RADIL
Ras-associating and dilute domain-containing protein.
    
 0.550
GRHL3
Grainyhead-like protein 3.
      
 0.518
PARG
Poly(ADP-ribose) glycohydrolase.
   
  
 0.505
RND3
Rho-related GTP-binding protein RhoE.
    
 0.475
ARHGAP1
Rho GTPase-activating protein 1.
     
0.443
RND1
Rho-related GTP-binding protein Rho6.
    
 0.427
RHOC
Rho-related GTP-binding protein RhoC.
    
 0.427
RHOA
Transforming protein RhoA.
    
 0.427
RHOB
Rho-related GTP-binding protein RhoB.
    
 0.427
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.