RPRD2 protein (Lonchura striata) - STRING interaction network

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Known Interactions

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Predicted Interactions

gene neighborhood

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textmining

co-expression

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Score

RPRD2

Regulation of nuclear pre-mRNA domain-containing protein 2. (1258 aa)

Predicted Functional Partners:

RPAP2

0.882

POLR2B

0.881

POLR2G

0.841

RPRD1B

0.841

PCF11

0.805

XRN2

0.774

RPRD1A

0.771

POLR2C

0.750

ENSLSDP00000015676

0.738

SSU72

0.735

Your Current Organism:

Lonchura striata

NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSLSDP00000015676	PCF11	ENSLSDP00000015676	ENSLSDP00000001168	annotation not available	Pre-mRNA cleavage complex 2 protein Pcf11.	0.743
ENSLSDP00000015676	POLR2B	ENSLSDP00000015676	ENSLSDP00000009506	annotation not available	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.998
ENSLSDP00000015676	POLR2C	ENSLSDP00000015676	ENSLSDP00000022415	annotation not available	DNA-directed RNA polymerase II subunit RPB3.	0.998
ENSLSDP00000015676	POLR2G	ENSLSDP00000015676	ENSLSDP00000009908	annotation not available	DNA-directed RNA polymerase II subunit RPB7.	0.998
ENSLSDP00000015676	RPAP2	ENSLSDP00000015676	ENSLSDP00000015397	annotation not available	Putative RNA polymerase II subunit B1 CTD phosphatase RPAP2.	0.959
ENSLSDP00000015676	RPRD1A	ENSLSDP00000015676	ENSLSDP00000024691	annotation not available	Regulation of nuclear pre-mRNA domain-containing protein 1A.	0.763
ENSLSDP00000015676	RPRD1B	ENSLSDP00000015676	ENSLSDP00000014114	annotation not available	Regulation of nuclear pre-mRNA domain-containing protein 1B.	0.836
ENSLSDP00000015676	RPRD2	ENSLSDP00000015676	ENSLSDP00000016696	annotation not available	Regulation of nuclear pre-mRNA domain-containing protein 2.	0.738
ENSLSDP00000015676	SSU72	ENSLSDP00000015676	ENSLSDP00000007499	annotation not available	RNA polymerase II subunit A C-terminal domain phosphatase SSU72.	0.617
PCF11	ENSLSDP00000015676	ENSLSDP00000001168	ENSLSDP00000015676	Pre-mRNA cleavage complex 2 protein Pcf11.	annotation not available	0.743
PCF11	POLR2B	ENSLSDP00000001168	ENSLSDP00000009506	Pre-mRNA cleavage complex 2 protein Pcf11.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.821
PCF11	POLR2C	ENSLSDP00000001168	ENSLSDP00000022415	Pre-mRNA cleavage complex 2 protein Pcf11.	DNA-directed RNA polymerase II subunit RPB3.	0.839
PCF11	RPAP2	ENSLSDP00000001168	ENSLSDP00000015397	Pre-mRNA cleavage complex 2 protein Pcf11.	Putative RNA polymerase II subunit B1 CTD phosphatase RPAP2.	0.802
PCF11	RPRD1A	ENSLSDP00000001168	ENSLSDP00000024691	Pre-mRNA cleavage complex 2 protein Pcf11.	Regulation of nuclear pre-mRNA domain-containing protein 1A.	0.771
PCF11	RPRD1B	ENSLSDP00000001168	ENSLSDP00000014114	Pre-mRNA cleavage complex 2 protein Pcf11.	Regulation of nuclear pre-mRNA domain-containing protein 1B.	0.771
PCF11	RPRD2	ENSLSDP00000001168	ENSLSDP00000016696	Pre-mRNA cleavage complex 2 protein Pcf11.	Regulation of nuclear pre-mRNA domain-containing protein 2.	0.805
PCF11	SSU72	ENSLSDP00000001168	ENSLSDP00000007499	Pre-mRNA cleavage complex 2 protein Pcf11.	RNA polymerase II subunit A C-terminal domain phosphatase SSU72.	0.928
PCF11	XRN2	ENSLSDP00000001168	ENSLSDP00000019949	Pre-mRNA cleavage complex 2 protein Pcf11.	5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II.	0.664
POLR2B	ENSLSDP00000015676	ENSLSDP00000009506	ENSLSDP00000015676	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	annotation not available	0.998
POLR2B	PCF11	ENSLSDP00000009506	ENSLSDP00000001168	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Pre-mRNA cleavage complex 2 protein Pcf11.	0.821