STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARID4AAT-rich interactive domain-containing protein 4A. (1277 aa)    
Predicted Functional Partners:
RBBP7
Histone-binding protein RBBP7.
   
 0.989
RBBP4
Histone-binding protein RBBP4.
   
 0.989
WDR73
WD repeat-containing protein 73.
   
 0.989
BRMS1L
Breast cancer metastasis-suppressor 1-like protein.
   
 0.986
SUDS3
Sin3 histone deacetylase corepressor complex component SDS3.
   
 0.986
SIN3B
Paired amphipathic helix protein Sin3b.
    
 0.981
SIN3A
Paired amphipathic helix protein Sin3a.
    
 0.981
SAP30
Histone deacetylase complex subunit SAP30.
    
 0.979
SAP30L
Histone deacetylase complex subunit SAP30L-B.
    
 0.979
PHF12
PHD finger protein 12.
    
 
 0.975
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.